Approach to the dermal mycobiota of the Craugastor fitzingeri group (Craugastoridae, Anura), along an environmental gradient in Bahía Málaga, Buenaventura, Colombia.
DOI:
https://doi.org/10.17533/udea.hm.v16n1a02Keywords:
Hongos, anfibios, herpetología, ranas, micología, ecología, microbiología, mycobiota, uicn, biodiversidadAbstract
Introduction: Amphibians, a clade crucial for the diversification and evolution of terrestrial vertebrates, currently face significant global threats due to fungal skin infections. However, the interaction between fungi and amphibians is key to host health and the conservation of their ecosystems. Objective: To compare fungal richness and composition across forested, intermediate, and urbanized zones, identifying recurring morphotypes associated with different habitat environments, and analyze their ecological implications for conservation. Methodology: Sampling was conducted over three nights by a team of four biologists, spanning from an urbanized area to a native forest in Bahía Málaga, Buenaventura, Colombia. Individuals were captured for a maximum of one hour, and skin samples were taken using sterilized cotton swabs, placed in Falcon tubes with nutrient medium and antibiotics. Samples were transported at 2–8 °C to the Universidad de Antioquia, where they were cultured on Sauro Agar Petri dishes, monitored daily, and isolated colonies were described. Multiple controls were implemented to verify medium and environmental contamination. Identification was performed using optical microscopy. Results: Representative strains of the genera Fusarium, Penicillium, Phialophora, and Trichosporon were isolated, along with 19 additional culturable filamentous fungal morphotypes. Conclusion: The fungal diversity isolated from C. fitzingeri highlights the ecological role of anurans as important reservoirs of mycobiota in their epidermis. These findings establish a baseline for exploring host-fungus interactions in tropical environments, relevant to amphibian health and conservation studies.
Downloads
References
[1]. West AG, Waite DW, Deines P, Bourne, DG, Digby A. et al. The microbiome in threatened species conservation. Biol. Conserv. 2019;229, 85-98. https://doi.org/10.1099/mic.0.001017
[2]. Elliott TF, Jusino MA, Trappe JM, Lepp H, Ballard GA, Bruhl JJ, et al. A global review of the ecological significance of symbiotic associations between birds and fungi. Fungal Divers. 2019;98(1):161-194. https://doi.org/10.1007/s13225-019-00436-3.
[3]. Sun D, Herath J, Zhou S, Ellepola G, Meegaskumbura M. Associations of Batrachochytrium dendrobatidis with skin bacteria and fungi on Asian amphibian hosts. ISME Commun. 2023;3(1):123. https://doi.org/10.1038/s43705-023-00332-7.
[4]. Abarca JG, Whitfield SM, Zuniga-Chaves I, Alvarado G, Kerby J, Murillo-Cruz C, Pinto-Tomás AA. Genotyping and differential bacterial inhibition of Batrachochytrium dendrobatidis in threatened amphibians in Costa Rica. Microbiology. 2021;167(3):001017. doi: 10.1099/mic.0.001017.
[5]. Maliye CC, Lohit YT. Mushroom sprouting out of a living frog. Reptil Amphib. 2024;31(1):e20966. https://doi.org/10.17161/randa.v31i1.20966.
[6]. Acosta Galvis AR. Lista de los anfibios de Colombia: Referencia en línea V.13.2023 (2024). Batrachia, Villa de Leyva, Boyacá, Colombia. Disponible en: http://www.batrachia.com.
[7]. SiB Colombia. Sistema de Información sobre Biodiversidad de Colombia. 2024. Recuperado de: https://biodiversidad.co/.
[8]. Scheele BC, Pasmans F, Skerratt LF, Berger L, Martel A, Beukema W, et al. Amphibian fungal panzootic causes catastrophic and ongoing loss of biodiversity. Science. 2019;363(6434):1459-1463. https://doi.org/10.1126/science.aav0379.
[9]. Fisher MC, Garner TWJ. Chytrid fungi and global amphibian declines. Nat Rev Microbiol. 2020;18(6):332-343.
[10]. Luedtke JA, Chanson J, Neam K, Hobin L, Maciel AO, Catenazzi A, et al. Ongoing declines for the world’s amphibians in the face of emerging threats. Nature. 2023;622(7982):308-314.
[11]. IUCN SSC Amphibian Specialist Group. Craugastor omoaensis. The IUCN Red List of Threatened Species. 2019:e.T56810A54369525. http://dx.doi.org/10.2305/IUCN.UK.2019-3.RLTS.T56810A54369525.en.
[12]. IUCN SSC Amphibian Specialist Group. Craugastor anciano. The IUCN Red List of Threatened Species. 2019:e.T56413A54365740. http://dx.doi.org/10.2305/IUCN.UK.2019-3.RLTS.T56413A54365740.en.
[13]. Frost DR. Amphibian species of the world: an online reference. Version 6.0. Am Mus Nat Hist. 2018.
[14]. Lieberman SS. Ecology of the leaf litter herpetofauna of a Neotropical rain forest: La Selva, Costa Rica. Acta Zool Mex. 1986;15:1-72.
[15]. Urbina-Cardona JN, Olivares-Pérez M, Reynoso VH. Herpetofauna diversity and microenvironment correlates across a pasture–edge–interior ecotone in tropical rainforest fragments in the Los Tuxtlas Biosphere Reserve of Veracruz, Mexico. Biol Conserv. 2006;132(1):61-75. http://dx.doi.org/10.1016/j.biocon.2006.03.014.
[16]. Pineda E, Rodríguez-Mendoza CA. Distribution and abundance of Craugastor vulcani: an endangered frog species from Los Tuxtlas, Veracruz, México. Rev Mex Biodivers. 2010;81(1):133-141.
[17]. Urbina-Cardona JN, Reynoso VH. Uso del microhábitat por hembras grávidas de la rana de hojarasca Craugastor loki en la selva alta perennifolia de Los Tuxtlas, Veracruz, México. Rev Mex Biodivers. 2009;80(2):571-573.
[18]. Rebollar EA, Gutiérrez-Preciado A, Noecker C, Eng A, Hughey MC, Medina D, et al. The skin microbiome of the neotropical frog Craugastor fitzingeri: inferring potential bacterial-host-pathogen interactions from metagenomic data. Front Microbiol. 2018;9:466. doi: 10.3389/fmicb.2018.00466.
[19]. Longo AV, Zamudio KR. Las fluctuaciones ambientales y las bacterias cutáneas del hospedero modifican la ventaja de supervivencia entre ranas y su patógeno fúngico. ISME J. 2017;11(2):349-361. https://doi.org/10.1038/ismej.2016.138.
[20]. Harris RN, Brucker RM, Walke JB, Becker MH, Schwantes CR, Flaherty DC, Minbiole KPC. Los microbios cutáneos en ranas previenen la morbilidad y mortalidad causadas por un hongo patógeno letal. ISME J. 2009;3(7):818-824. https://doi.org/10.1038/ismej.2009.27.
[21]. Bletz MC, Archer H, Harris RN, McKenzie VJ, Rabemananjara FCE, Rakotoarison A, Vences M. La ecología del hospedero, más que su filogenia, determina la estructura de la comunidad microbiana cutánea en anfibios del hotspot de biodiversidad de Madagascar. Front Microbiol. 2017;8:1530. https://doi.org/10.3389/fmicb.2017.01530.
[22]. Ospina-Sarria JJ, Angarita-Sierra T, Pedroza-Banda R. A new species of Craugastor (Anura: Craugastoridae) from the Magdalena River Valley, Colombia, with evaluation of the characters used to identify species of the Craugastor fitzingeri group. S Am J Herpetol. 2015;10(3):165-177. http://www.bioone.org/doi/full/10.2994/SAJH-D-14-00014.1
[23]. IDEAM. (2019). Atlas Climatológico de Colombia. Instituto de Hidrología, Meteorología y Estudios Ambientales.
[24]. Poveda G, Mesa OJ, Salazar LF, Arias PA, Moreno HA, Vieira SC, et al. El ciclo diurno de la precipitación en los Andes tropicales de Colombia. Mon Weather Rev. 2005;133(1):228-240. https://doi.org/10.1175/MWR-2853.1.
[25]. Mendoza AM, Aguirre-Rojas L, Sarria M, Giraldo A. Hongos dérmico saprofitos de Dendropsophus columbianus (Hylidae) en Caloto, Colombia. Bol Cient Mus Hist Nat. 2012;16(1):33-40.
[26]. Cepero de García MC, Restrepo Restrepo S, Franco-Molano AE, Cárdenas Toquica ME, Vargas Estupiñán N. Biología de hongos. 2012.
[27]. Index Fungorum Partnership. Index Fungorum. 2024. Disponible en: http://www.indexfungorum.org/names/names.asp
[28]. Afsar B, Afsar M, Kalyoncu F. Antimicrobial activity in the skin secretion of brown frog, Rana macrocnemis (Boulenger, 1885) collected from Turkey. Sci Res Essays. 2011;6(5):1001-1004. DOI:10.5897/SRE10.237.
[29]. Abbas AK, Lichtman AH, Pillai S. Cellular and molecular immunology E-book. Elsevier Health Sciences; 2014.
[30]. Walke JB, Becker MH, Loftus SC, House LL, Teotonio TL, Minbiole KPC, Belden LK. Amphibian skin may select for rare environmental microbes. ISME J. 2015;9(3):679-687. https://doi.org/10.1038/ismej.2014.77
Downloads
Published
How to Cite
Issue
Section
License
Copyright (c) 2025 Hechos Microbiológicos

This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.