International Accreditation for High Resolution HLA Typing by NGS Sequence for 11 Locis (HLA-A, B, C DRB1, DRB3/B4/B5, DQA1, DQB1, DPA1, DPB1)

Authors

  • Juan Jose Yunis 1)Director Científico, Servicios Médicos Yunis Turbay y Cia. SAS 2) Profesor Titular, Departamento de Patología, Facultad de Medicina e instituto de Genética, Universidad Nacional de Colombia, Bogotá, D.C. https://orcid.org/0000-0001-7688-9094
  • Mayorie Antonieta Dakkak Araujo Servicios Médicos Yunis Turbay y Cia SAS
  • Adriana Lucia Chamorro Jimenez Servicios Médicos Yunis Turbay y Cia SAS
  • Natalia Arias Morales Servicios Médicos Yunis Turbay y Cia SAS
  • Jhon Henry Rodriguez Matiz Servicios Médicos Yunis Turbay y Cia SAS https://orcid.org/0000-0003-2265-8404
  • Alexandra Cortes Hernandez Servicios Médicos Yunis Turbay y Cia SAS

Keywords:

HLA, NGS, High Resolution

Abstract

Introduction: High-resolution HLA typing is required for haplo-identical HLA intrafamilial donors, and for the selection of unrelated donors from international registries and cord blood unit banks. To date, all confirmatory typing
was carried out outside the country, since there was no internationally accredited laboratory to carry out these studies. Since 2017, our institution
began high-resolution HLA typing by NGS sequence with the Illumina Tru-Sight HLA platform; subsequently, with the CareDx AlloSeqTx platform, obtaining accreditation for NGS typing in 2020. Since 2021, we began analyzes with the Miafora platform (Immucor Corp) and this year we have received international accreditation by the European Federation of Immunogenetics
(EFI). for high-resolution HLA analysis by sequence for related intrafamilial donors, and for unrelated donors, both from cord blood units and international donor registries.
Methods: Validation and accreditation of the Miafora HLA 11 Loci platform by NGS was carried out on a MySeq equipment using 10 (retrospective) samples from International Intercomparison tests of the American Society
for Histocompatibility and Immunogenetics (ASHI) program and 20 prospective samples from the same program. The agreement of the results
obtained from the processed samples with the Intercomparison reports issued by ASHI was evaluated.
Results: From a total of 30 samples analyzed (660 loci), concordance was obtained in the typing in the 30 samples processed. However, a discrepancy
in the reporting format was observed at 2 loci (3.3%) because possible ambiguities
in the G-Groups or P-Groups were not taken into account (https://hla.alleles.org/alleles/g_groups.html) in the nomenclature used. Corrective actions were carried out to resolve the points related to nomenclature. International Accreditation for High Resolution HLA Typing by NGS Sequence
was obtained.

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Author Biographies

Juan Jose Yunis, 1)Director Científico, Servicios Médicos Yunis Turbay y Cia. SAS 2) Profesor Titular, Departamento de Patología, Facultad de Medicina e instituto de Genética, Universidad Nacional de Colombia, Bogotá, D.C.

1)Director Científico, Servicios Médicos Yunis Turbay y Cia. SAS 2) Profesor Titular, Departamento de Patología, Facultad de Medicina e instituto de Genética, Universidad Nacional de Colombia, Bogotá, D.C.

Mayorie Antonieta Dakkak Araujo, Servicios Médicos Yunis Turbay y Cia SAS

Coordinadora área inmunogenética

Adriana Lucia Chamorro Jimenez, Servicios Médicos Yunis Turbay y Cia SAS

Analista área Inmunogenética

Natalia Arias Morales, Servicios Médicos Yunis Turbay y Cia SAS

Analista área inmunogenética

Jhon Henry Rodriguez Matiz, Servicios Médicos Yunis Turbay y Cia SAS

Analista área inmunogenética

Alexandra Cortes Hernandez, Servicios Médicos Yunis Turbay y Cia SAS

Analista área Inmunogenética

References

Yin Y, Butler C, Zhang Q. Challenges in the application of NGS in the clinical laboratory. Hum Immunol. 2021 Nov;82(11):812-819. doi: 10.1016/j.humimm.2021.03.011. Epub 2021 Apr 21. PMID: 33892986.

Published

2023-10-26

How to Cite

1.
Yunis JJ, Dakkak Araujo MA, Chamorro Jimenez AL, Arias Morales N, Rodriguez Matiz JH, Cortes Hernandez A. International Accreditation for High Resolution HLA Typing by NGS Sequence for 11 Locis (HLA-A, B, C DRB1, DRB3/B4/B5, DQA1, DQB1, DPA1, DPB1). Iatreia [Internet]. 2023 Oct. 26 [cited 2025 Feb. 5];36(2-S). Available from: https://revistas.udea.edu.co/index.php/iatreia/article/view/354606

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